Journal of Plant Biotechnology : eISSN 2384-1397 / pISSN 1229-2818

Cited by CrossRef (33)

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  3. Paula A. M. R. Valdisser, Wendell J. Pereira, Jâneo E. Almeida Filho, Bárbara S. F. Müller, Gesimária R. C. Coelho, Ivandilson P. P. de Menezes, João P. G. Vianna, Maria I. Zucchi, Anna C. Lanna, Alexandre S. G. Coelho, Jaison P. de Oliveira, Alessandra da Cunha Moraes, Claudio Brondani, Rosana P. Vianello. In-depth genome characterization of a Brazilian common bean core collection using DArTseq high-density SNP genotyping. BMC Genomics 2017;18
    https://doi.org/10.1186/s12864-017-3805-4
  4. Verónica Guajardo, Simón Solís, Rubén Almada, Christopher Saski, Ksenija Gasic, María Ángeles Moreno. Genome-wide SNP identification in Prunus rootstocks germplasm collections using Genotyping-by-Sequencing: phylogenetic analysis, distribution of SNPs and prediction of their effect on gene function. Sci Rep 2020;10
    https://doi.org/10.1038/s41598-020-58271-5
  5. Jauhar Ali, Anumalla Mahender, G. D. Prahalada, Ma. Anna Lynn Sevilla, Angelito Galang, Erik Jon De Asis, Madonna Dela Paz, Corinne Mira Marfori-Nazarea, Katrina Leslie Nicolas, Ricky Vinarao. Genomic Designing of Climate-Smart Cereal Crops. 2020.
    https://doi.org/10.1007/978-3-319-93381-8_1
  6. E. Lamalakshmi Devi, Ch. Premabati Devi, Sudhir Kumar, Susheel Kumar Sharma, Aruna Beemrote, S.K. Chongtham, Chongtham Henary Singh, Chongtham Tania, T. Basanta Singh, Arati Ningombam, Romila Akoijam, I.M. Singh, Y. Rajen Singh, Sapam Monteshori, Yumnam Omita, N. Prakash, S.V. Ngachan. Marker assisted selection (MAS) towards generating stress tolerant crop plants. Plant Gene 2017;11:205
    https://doi.org/10.1016/j.plgene.2017.05.014
  7. Mohamed Hamdy Amar, Mahmoud Magdy, Lu Wang, Hui Zhou, Beibei Zheng, Xiaohan Jiang, Aiman H. Atta, Yuepeng Han, Brian Beres. Peach chloroplast genome variation architecture and phylogenomic signatures of cpDNA introgression in Prunus. Can. J. Plant Sci. 2019;99:885
    https://doi.org/10.1139/cjps-2019-0129
  8. Mihret Yirgu, Mulugeta Kebede, Tileye Feyissa, Berhane Lakew, Aemiro Bezabih Woldeyohannes, Mulusew Fikere. Single nucleotide polymorphism (SNP) markers for genetic diversity and population structure study in Ethiopian barley (Hordeum vulgare L.) germplasm. BMC Genom Data 2023;24
    https://doi.org/10.1186/s12863-023-01109-6
  9. Alejandro Bolívar-González, Ramón Molina-Bravo, William Solano-Sánchez, Emanuel Araya-Valverde, Suzana T. Ivamoto-Suzuki, Luiz F. P. Pereira, Andrés Gatica-Arias. SNP markers found in non-coding regions can distinguish among low-variant genotypes of Arabica and other coffee species. Genet Resour Crop Evol 2023;70:1215
    https://doi.org/10.1007/s10722-022-01498-0
  10. Laura Cuervo-Alarcon, Matthias Arend, Markus Müller, Christoph Sperisen, Reiner Finkeldey, Konstantin V. Krutovsky. A candidate gene association analysis identifies SNPs potentially involved in drought tolerance in European beech (Fagus sylvatica L.). Sci Rep 2021;11
    https://doi.org/10.1038/s41598-021-81594-w
  11. Rabiatul-Adawiah Zainal-Abidin, Norliza Abu-Bakar, Yun-Shin Sew, Sanimah Simoh, Zeti-Azura Mohamed-Hussein. Discovery of Functional SNPs via Genome-Wide Exploration of Malaysian Pigmented Rice Varieties. International Journal of Genomics 2019;2019:1
    https://doi.org/10.1155/2019/4168045
  12. Thomas Kadampanattu Uthup, Anantharamanan Rajamani, Minimol Ravindran, Thakurdas Saha. Distinguishing CPT gene family members and vetting the sequence structure of a putative rubber synthesizing variant in Hevea brasiliensis. Gene 2019;689:183
    https://doi.org/10.1016/j.gene.2018.12.001
  13. Sangam L. Dwivedi, Armin Scheben, David Edwards, Charles Spillane, Rodomiro Ortiz. Assessing and Exploiting Functional Diversity in Germplasm Pools to Enhance Abiotic Stress Adaptation and Yield in Cereals and Food Legumes. Front. Plant Sci. 2017;8
    https://doi.org/10.3389/fpls.2017.01461
  14. M. Rojas, F. Ascencio, A. Tiessen, M. Arce-Montoya, G. Gómez-Anduro. Infection of maize inbred B73 by Ustilago maydis and Fusarium proliferatum triggers differential expression of the β-glucosidase genes. Physiological and Molecular Plant Pathology 2018;104:127
    https://doi.org/10.1016/j.pmpp.2018.09.007
  15. Sima Taheri, Thohirah Lee Abdullah, Shri Mohan Jain, Mahbod Sahebi, Parisa Azizi. TILLING, high-resolution melting (HRM), and next-generation sequencing (NGS) techniques in plant mutation breeding. Mol Breeding 2017;37
    https://doi.org/10.1007/s11032-017-0643-7
  16. Rajender Singh, M. A. Iquebal, C. N. Mishra, Sarika Jaiswal, Deepender Kumar, Nishu Raghav, Surinder Paul, Sonia Sheoran, Pradeep Sharma, Arun Gupta, Vinod Tiwari, U. B. Angadi, Neeraj Kumar, Anil Rai, G. P. Singh, Dinesh Kumar, Ratan Tiwari. Development of model web-server for crop variety identification using throughput SNP genotyping data. Sci Rep 2019;9
    https://doi.org/10.1038/s41598-019-41204-2
  17. Anjan Hazra, Rakesh Kumar, Chandan Sengupta, Sauren Das. Genome-wide SNP discovery from Darjeeling tea cultivars - their functional impacts and application toward population structure and trait associations. Genomics 2021;113:66
    https://doi.org/10.1016/j.ygeno.2020.11.028
  18. Hande Morgil, Yusuf Can Gercek, Isil Tulum. The Recent Topics in Genetic Polymorphisms. 2021.
    https://doi.org/10.5772/intechopen.91886
  19. Jinkwan Jo, Min-Young Kang, Kyung Seok Kim, Hye Rim Youk, Eun-Jo Shim, Hongsup Kim, Jee-Soo Park, Sung-Chur Sim, Byung Cheon Yu, Jin-Kee Jung. Genome-wide analysis-based single nucleotide polymorphism marker sets to identify diverse genotypes in cabbage cultivars (Brassica oleracea var. capitata). Sci Rep 2022;12
    https://doi.org/10.1038/s41598-022-24477-y
  20. Yeshitila Mekbib, Kassahun Tesfaye, Xiang Dong, Josphat K. Saina, Guang-Wan Hu, Qing-Feng Wang. Whole-genome resequencing of Coffea arabica L. (Rubiaceae) genotypes identify SNP and unravels distinct groups showing a strong geographical pattern. BMC Plant Biol 2022;22
    https://doi.org/10.1186/s12870-022-03449-4
  21. Vikas Dwivedi, Lalita Pal, Dinesh Yadav. Bioinformatics in Agriculture. 2022.
    https://doi.org/10.1016/B978-0-323-89778-5.00026-X
  22. Dieimes Bohry, Helaine Christine Cancela Ramos, Pedro Henrique Dias dos Santos, Marcela Santana Bastos Boechat, Fernanda Abreu Santana Arêdes, Adriana Azevedo Vimercati Pirovani, Messias Gonzaga Pereira. Discovery of SNPs and InDels in papaya genotypes and its potential for marker assisted selection of fruit quality traits. Sci Rep 2021;11
    https://doi.org/10.1038/s41598-020-79401-z
  23. Kamal Khadka, Davoud Torkamaneh, Mina Kaviani, Francois Belzile, Manish N. Raizada, Alireza Navabi. Population structure of Nepali spring wheat (Triticum aestivum L.) germplasm. BMC Plant Biol 2020;20
    https://doi.org/10.1186/s12870-020-02722-8
  24. Tofazzal Islam, Nadia Afroz, ChuShin Koh, M. Nazmul Hoque, Md. Jillur Rahman, Dipali Rani Gupta, Nur Uddin Mahmud, Abdullah Al Nahid, Rashedul Islam, Pankaj K. Bhowmik, Andrew G. Sharpe. Whole-genome sequencing of a year-round fruiting jackfruit (Artocarpus heterophyllus Lam.) reveals high levels of single nucleotide variation. Front. Plant Sci. 2022;13
    https://doi.org/10.3389/fpls.2022.1044420
  25. Qiang Li, Manoj Sapkota, Esther van der Knaap. Perspectives of CRISPR/Cas-mediated cis-engineering in horticulture: unlocking the neglected potential for crop improvement. Hortic Res 2020;7
    https://doi.org/10.1038/s41438-020-0258-8
  26. Imran SAFDER, Gaoneng SHAO, Zhonghua SHENG, Peisong HU, Shaoqing TANG. Identification of SNPs in rice GPAT genes and in silico analysis of their functional impact on GPAT proteins. Not Bot Horti Agrobo 2021;49:12346
    https://doi.org/10.15835/nbha49312346
  27. Pooja Bangar, Neetu Tyagi, Bhavana Tiwari, Sanjay Kumar, Paramananda Barman, Ratna Kumari, Ambika Gaikwad, K. V. Bhat, Ashok Chaudhury. Identification and characterization of SNPs in released, landrace and wild accessions of mungbean (Vigna radiata (L.) Wilczek) using whole genome re-sequencing. J. Crop Sci. Biotechnol. 2021;24:153
    https://doi.org/10.1007/s12892-020-00067-0
  28. Hua Yang, Nur Shuhadah Mohd Saad, Muhammad Ishaq Ibrahim, Philipp E. Bayer, Ting Xiang Neik, Anita A. Severn-Ellis, Aneeta Pradhan, Soodeh Tirnaz, David Edwards, Jacqueline Batley. Candidate Rlm6 resistance genes against Leptosphaeria. maculans identified through a genome-wide association study in Brassica juncea (L.) Czern. Theor Appl Genet 2021;134:2035
    https://doi.org/10.1007/s00122-021-03803-4
  29. Xiaoxue Sun, Xing Li, Yin Lu, Shan Wang, Xiaomeng Zhang, Kang Zhang, Xiangjie Su, Mengyang Liu, Daling Feng, Shuangxia Luo, Aixia Gu, Yu Fu, Xueping Chen, Shuxin Xuan, Yanhua Wang, Donghui Xu, Shumin Chen, Wei Ma, Shuxing Shen, Feng Cheng, Jianjun Zhao. Construction of a high-density mutant population of Chinese cabbage facilitates the genetic dissection of agronomic traits. Molecular Plant 2022;15:913
    https://doi.org/10.1016/j.molp.2022.02.006
  30. Christian Bharathi Antony Raj, Hemavathy Nagarajan, Mohamed Hameed Aslam, Santhiya Panchalingam. Bioinformatics in Rice Research. 2022.
    https://doi.org/10.1007/978-981-16-3993-7_17
  31. Ivelin Pantchev, Goritsa Rakleova, Atanas Pavlov, Atanas Atanassov. Sweeteners. 2022.
    https://doi.org/10.1007/978-3-319-32004-5_25-1
  32. L. Karapetsi, I. Karamichali, G. Pantelidis, P. Drogoudi, P. Madesis. SNPs identification and association study of fruit quality genes from selected whole-genome sequenced peach cultivars grown in Greece. Acta Hortic. 2022:291
    https://doi.org/10.17660/ActaHortic.2022.1352.39
  33. Rabiatul-Adawiah Zainal-Abidin, Zeti-Azura Mohamed-Hussein. Recent Advances in Rice Research. 2022.
    https://doi.org/10.5772/intechopen.94876