Journal of Plant Biotechnology : eISSN 2384-1397 / pISSN 1229-2818

Table. 5.

Table. 5.

Partially- or fully-linked molecular markers for some traits

Resistant trait Marker name Marker series Genotype name Reference
CBD RAPD M62027, M20830,N18250 Coffea arabica Charles et al. 1997

CBD SSR Sat 207,Sat 235 C. arabica Gichuru et al. 2008

AFLP ACT-CTT-h, AAC-CTG-a, ACC-CAA-e, ACT-CTT-f, ACT-CAA-c, AGC-CTG-c, AGC-CTG-d, AGC-CAT-a

CLR SCAR BA-48-210-f, SP-M8-SH3 C. arabica Mahe et al. 2008

SSR Sat 244

AFLP M5, M8, M16,M18

CLR AFLP AA-11, 12, -13, -14, -22, CC-14, -21, -22, AC-14 C. arabica and Coffea canephora Juan et al. 2009

SSR Sat 225, Sat 229, Sat 259

CLR AFLP E.CTC/M.TTT405, E.CCT/M.TTC230, E.CGT/M.TGT300 C. arabica Giovani et al. 2010

CLR SSR Sat 160, Sat 281 (near to the SH3 gene) C. arabica Lashermes et al. 2010

Rust disease SSR Sat 244 C. arabica Prakash et al. 2011

AFLP BA-124-12K-f, Sp-M8-SH3 (closely linked to the SH3 gene)

Coffee rust SCAR ETCA-EATG560, ETGT-EGGG350, ETCA-EAGA530, ETGC-EACA320, ETGT-EACA480, EGTA-ETGA605 C. arabica Valdir et al. 2011

For diversity study RAPD OP- E, F, G, I, J, K, M, N, X, Y C. arabica and C. canephora genotypes Kathurima et al. 2012

SSR M24, Sat 235

CLR and CBD SSR M24, Sat 235 Robusta Gimase et al. 2014

Root length RAPD CM21130, CPCM13400, OPS1850, OPY201200, OPZ101350 C. canephora Achar et al. 2015

Root dry weight RAPD OPL11400 C. canephora Achar et al. 2015

Root-knot nematodes SSR SSRCafé 32 allele 2, SSRCafé 19 allele 2, SSRCafé 20 allele 1, SSRCafé 37 allele 2, SSRCafé 13 allele 5, SSRCafé39 Híbrido de Timor 440-10 Catuaí Amarelo IAC 86 progenies Pereira et al. 2016

CLR and CBD SSR Sat 235,Sat 207 C. arabica Alkimim et al. 2017

CLR SCAR BA124-12K-f (closest to the SH3 gene) C. arabica Valencia et al. 2017

Lipid content SNP candidate genes S1_24382872, S2_14041151, S2_20725291, S6_36332719,S8_25559761 C. arabica Sant Ana et al. 2018

Identify of high caffeine content 11 SNPs C. arabica Trans et al. 2018

CBD Candidate genes T,R, and K genes C. arabica Gimase et al. 2021

Drought tolerance Candidate genes CaMYB1,CaERF017, CaEDR2, CaNCED, CaAPX1, CaAPX5, CaGolS3, CaDHN1,CaPYL8a Icatu Vermelho IAC 3851-2 × Catimor UFV 1602-215 progenies Santos et al. 2021
J Plant Biotechnol 2021;48:207-22 https://doi.org/10.5010/JPB.2021.48.4.207
© 2021 J Plant Biotechnol