J Plant Biotechnol 2022; 49(2): 107-117

Published online June 30, 2022

https://doi.org/10.5010/JPB.2022.49.2.107

© The Korean Society of Plant Biotechnology

Fungal biopriming increases the resistance of wheat to abiotic stress

Ashraf S. A. El-Sayed ・Hanan E. Dief ・ElSayed A. Hashem ・Ahmed M. Desouky ・Zamarud Shah ・Salwa Fawzan

Enzymology and Fungal Biotechnology Lab, Botany and Microbiology Department, Faculty of Science, Zagazig University, Zagazig, 44519, Egypt
STEM School, Al-Sharqia, Zagazig
Department of Biotechnology, University of Science and Technology, Bannu, Khyber, Pakhtunkhwa, Pakistan

Correspondence to : e-mail: ashrafsabry@zu.edu.eg

Received: 20 November 2021; Revised: 21 December 2021; Accepted: 21 December 2021

This is an Open-Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

Increasing soil salinity is one of the global challenges that the agriculture sector in Egypt has been facing; 33% of the cultivated land in Egypt, which includes merely 3% of the entire land area, is already salinized. The present review sheds light on the role of fungal biopriming, a technique in which hydrated seeds are inoculated with beneficial fungal flora, in mitigating the deleterious influence of NaCl tension. Endophytic fungi were recognized to be able to interact with several plant species, markedly contributing to the mitigation of NaCl stress in these plants, such that some plants get impoverished to their absent associated microbes under stressful conditions.

Keywords Fungal biopriming, Abiotic stress, Wheat salt stress

Seed priming approaches were initially nominating for alleviating the plant environmental stresses. Several approaches of priming were reported such as hydropriming, osmopriming, hormopriming, thermopriming, nutripriming, chemical priming and biopriming (Heydecker et al. 1973; Lutts et al. 2016). Compiling the process of seeds hydration and microbial inoculation using beneficial microbes has been nominated as biological priming “biopriming”. It plays vital roles in increasing seed viability, germination so, enhancing the growth of plant and also, decrease other stresses on the plant (Afzal et al. 2016; Lutts et al. 2016). The fungal endophytes are able to interplay with plants and significantly participate in their tolerance to different forms of both stresses (biotic and abiotic) such as salinity, heat, drought, plant pathogens, herbivores, shortage of elements of nutrition to great limit that some plants get impoverished to their absent associated microbes under stressful conditions (de Zelicourt et al. 2013; El-Sayed et al. 2019). Stress control by phytosymbiotic are mainly occurred by stimulation of systems responsible for stress in the host cell, and anti-stress compounds produced by endophytes. These phytohormones could promotes the root hairs growth by increasing the total area of root, ease the nutrients uptake, inducing the activity of 1-aminocyclopropane-1-carboxylate deaminasee (Lata et al. 2018; Milošević et al. 2012; Prasad et al. 2016; Singh et al. 2011; Vardharajula et al. 2017).

Agriculture is the prime activity for the Egyptian population, however, degradation of soils through salinity was the major agricultural problem. Soils in the Nile Delta are affected by different types of salts comes from three distinct sources named logging, water irrigation, and the interruption of saline water. Salinity can affect the uptake of nutrients and water absorption as well as the permeability of cell membranes, and this appears clearly by the balance water and nutrients, and mutually effect the metabolic process in the plant, hormones production, exchange of gases, and the accumulation of reactive oxygen species (ROS) (Gheyi et al. 2016). Visual signs of salt harm in plant growth seem progressive: wilting, leaves yellowing and abnormal growth, followed by losing of green colour and appearance pf chlorotic lesion on the green parts, burning of the upper parts of leaves, and necrotic lesions on the leaves, then finally, the oldest leaves takes the scorched appearance (Machado and Serralheiro 2017). Salinity decreases the plant growth because owing to salinity the plant may face four types of stresses firstly, water stress induced by osmosis. Secondly, the ion toxicity stress because of the high ions concentrations as sodium and chloride. Thirdly, the imbalance ions nutrients, because higher levels of sodium and chloride can decrease the uptake of other ions as K+, NO-, PO43-. Fourthly, the stress caused by high production of ROS which causes macromolecules damage.

Soil salinity diminishes the net photosynthetic process by decreasing the stomatal conductance, CO2 pressure in leaves, and cell content of chlorophyll, altering the structure of chloroplasts, decreasing the photo dependent chemical reactions, and increasing the tissues content of soluble sugars (Iqbal et al. 2014). Osmoregulants (proline, protein, mannitol, sorbitol, glycine and betaine) build up in salt stressed plants to reduce the osmotic potential, thereby maintaining cell turgidity that provides in turn the driving gradients for uptake of water (Rasool et al. 2013). The main cations associated with salinity are usually sodium, calcium and magnesium, while the main anions associated with salinity were Cl-, SO4-2 and HCO3- (Yadav et al. 2011). Plants are either glycophytes or halophytes depending on their potency for growing on different concentrations of salt. Halophytes are completely grows on steep dose of salt, Atriplex nummularia (a saltbush). A lot of the terrestrial plants are classified as glycophytic with low tolerance to salt high concentrations (Rasool et al. 2013). Plants with salt sensitivity and tolerance are differs in the speed of progression of salt toxicity, may be days or weeks or months, relying on the species of plant and salinity degree, is the timescale (Carillo et al. 2011). To study the effects of osmotic and ionic salt stress, (Munns et al. 1995) proposed a model of two-phase in which the first, osmotic phase, which commence instantly (within minutes) after the accumulation of salt near the roots increases to a threshold level which is nearly 40 mM of sodium chloride for most plants, or less in plants sensitive for salt such as Arabidopsis and rice, leading to a significant reduction in shoot growth because the root system hardly gets the needed water and also, due to a loss of cell wall extensibility (Läuchli and Grattan 2007; Le Gall et al. 2015; Munns and Tester 2008; Tilbrook and Roy 2013).

Ion-specific, the second phase, is the stage at which plants respond to salinity (in days, weeks or months): salt accumulation in old leaves reaches to its toxic concentrations (which in turn stop their growth and prevent the dilution of salt arrives to them as occur in younger leaves) leading to their death, the inescapable destiny. If the death rate exceeds the production rate of new leaves, the photosynthesis process of the plant will not be able to cover carbohydrate demand of the newly growing leaves, which subsequently decreases the rate of their growth (Läuchli and Grattan 2007; Munns and Tester 2008).

Different methods were used from past to present trying to adapt to different stresses, including traditional methods of breeding “hybridization and selection” and modern technologies as “mutation, polyploidy breeding and genome editing” (Jisha et al. 2013). Genetic engineering possesses in a reasonable manner being the affordable method due to the incorporation of targets, and heterologous traits to the elite crop lines. However, these methods are expensive, cumbersome requiring biosafety regulations that hinders the implementation of transgenic plants to the field (Jisha et al. 2013). The alternative solution would be more affordable, cost effective and can be adopted without complications (Jisha et al. 2013). Different research has been done to decrease the time between planting to development as this plays a fundamental role in the production of different crops. Seed priming technique is one of the results these researches. This technique was proposed for the first time by (Heydecker et al. 1973). Priming technique is an effective method for enhancing the quality of seed, increasing the rates for germination resulting in high resistance levels of stress and high yields production, improving the product competitiveness, correlating to seed vigour, that limited by various genetic and environmental traits (Paparella et al. 2015).

Priming of seeds is a pre-sowing of seeds by exposing to particular solutions for a specific time that enables partial entrance of water before emerging of radicle. When a dry non-dormant seeds were kept in water, imbibition, lag phase, and appearance of the radicle by the testa follows one another during the process of germination (Dalil 2014; Lutts et al. 2016; Singh et al. 2015). During priming the water supply to the seed is a limiting step, because it makes the level of seed moisture below its required level for exact germination. At this level the physiological processes controlling the pre-germination metabolism can be started but the transition of seed towards its full germination is prevented. This precludes seeds from going through the third phase of hydration (growth) by stretching and detaining seeds within the lag phase (activation) (Ibrahim 2016; Singh et al. 2015). Being desiccation-tolerant, seeds have to be re-dried again to its initial content of moisture before radicle emergence to preserve the benefits of the priming method (Ibrahim 2016; Mondal and Bose 2014). The seed should be dried at imbibition phase (I) or activation (II), but growth phase III is an advanced phase allowing re-drying keeping the seed quality. Post-radicle emergence seed dehydration leads to seed vigour damage and losing seed viability. Life expectancy of primed seeds is usually long on condition of a successful drying-back and storage (Ibrahim 2016; Paparella et al. 2015).

Numerous factors affect priming efficiency and extremely relies on types of plant species and priming technique, namely osmotic, water potential, priming agent, duration, light, aeration, and seed type. All of these factors plays an important role in priming success and germination requriments (Lutts et al. 2016). The common priming techniques include hydropriming, osmopriming, hormopriming, thermopriming, chemopriming, and biopriming. Using osmotic solution with low water potential to soak the seeds in is known as osmopriming. The low potential of water used in the osmotic solutions, enables water to enter into seed slowly allowing the gradual activation of germination phases without occurrence of radicle emergence (Jisha et al. 2013; Lutts et al. 2016; Paparella et al. 2015).

In priming by solid matrix (matriconditioning), solid or semi-solid matrix has been used replacing the liquid one (Jisha et al. 2013). Solid priming has been emerged as an alternative approach of osmopriming because of the high price and technical problems of osmopriming. In contrast to osmopriming in which liquid solutions (liquid priming) are used, in solid priming, a solid matrix is to coat the seeds, due its ability to adjust the moisture content and controlling water uptake (Fig. 1). This solid matrix allows slowly hydration of seeds (Jisha et al. 2013; Lutts et al. 2016; Paparella et al. 2015). We can improve the seed germination of different crops by adding hormones and PGPR during priming process (Jisha et al. 2013). For example in hormopriming different regulators are used as ABA, auxins, GAs, polyamines, and SA (Lutts et al. 2016). Pre-sowing seeds at different temperatures is referred to as thermopriming, generally, the best results can be achieved at low temperatures. Although in some species priming with higher temperatures is preferable and gives a good germination results mainly for crops growing in warm climates (Paparella et al. 2015).

Fig. 1. The common recommended method for seed bio-priming

Chemopriming is the process in which seeds are treated with various chemicals before its germination. The priming process in this case can use different compounds (natural or synthetic) some of these compounds are ascorbic acid, urea, chitosan, sodium nitroprusside, and so on (Jisha et al. 2013; Lutts et al. 2016). In nutripriming, seeds were soaked in water containing different limiting nutrients instead of water alone. This method prove the important role of mineral nutrition in increasing the plant resistance to different types of stress (Jisha et al. 2013; Lutts et al. 2016).

In hydropriming, soaking the seeds in water (distilled and sterilized) at room temperature (in a range from 5 to 20°C) till hydration level in seeds equal to 10-20% of full absorption. As mentioned, it is important to dry the seeds soaked to their initial weights with air (Jisha et al. 2013; Paparella et al. 2015). Biopriming is the process in which seed hydration by soaking in water containing beneficial microbes, thus improving the viability of seed, germination rate, plant growth, protecting the plants from the diseases (microbial or physiological). Immersion of the seeds for 12 h in water, is the recommended method of biopriming. The formulated of the microorganisms were added to the seeds (pre-immersed) at the level of 10 g/kg of the crop seeds and mixed with each other. The seeds were collected in polythene bags, and to maintain high level of humidity, the bags were covered with moist jute sack for two days at 30°C, allowing to the adherence biological agent to the seeds surface making a protective layer surrounding the seed coat (Afzal et al. 2016; Lutts et al. 2016; Prasad et al. 2016).

Several reports document that plants can better withstand salt stress by seed biopriming approach. Biopriming of durum wheat grains with Bacillus pumilus, Virgibacillus sp., B. pumilus, and B. tequilensis gave the highest protection against Fusarium disease, promote the plant growth, and salinity adaptation (Feto et al. 2019). Seed biopriming of rice (Oryza sativa) with five salinity adaptive isolates of Trichoderma harzianum gave a significant increase in length of shoot and root, leaves number, leaf area, rate of photosynthesis process, leaf content of chlorophyll and plant fresh weight comparing to salt stressed control plant (Rawat et al. 2012). Effect of Trichoderma lixii on Zea mays as a seed fungal biopriming agent was studied under sodium chloride stress. Authors observed a decrease amount of both hydrogen peroxide and MDA along with an increase in the content of soluble protein and proline (Pehlivan et al. 2017). Biopriming of Seeds using Pseudomonas geniculate (salt tolerant endophyte) caused a growth promotion and mitigated the salt stress in Zea mays. Application of P. geniculate reduced the sodium uptake and increased the uptake of potassium and calcium in the roots of maize showing its role in controlling the ionic balance/homeostasis in the roots of maize under high salt stresses (Singh et al. 2020). Several studies studied the ability of five salinity tolerant isolates of T. harzianum applied via seed biopriming by attenuating the severity of salinity on wheat (Triticum aestivum L.). Fungal biopriming resulted in improved germination percentage, lengths of shoot and root systems, leaves content of chlorophyll and membrane stability index than control at all salt stress levels (Rawat et al. 2011). Biopriming of Brassica napus (canola) seeds using B. subtilis and Macrophomina phaseolina could enhance the germination index and alleviates the effects of salinity (Mousavi and Omidi 2019). Researchers should thereby study more to show the impact of seed biopriming with microbial inoculants on the removal of environmental stresses.

Plants lives in close association with the microorganisms either as neighbours in the soil, or especially those microorganisms lives internally in plants as endophytes (El-Baz et al. 2011a; El-Baz et al. 2017, 2018; Hardoim et al. 2015). endophytic fungi can interact with many species and hence cause a significant contribution in the plant adaptation to different environmental stresses such as drought, heat, pathogens infect, insects infection, or nutrients limitation to the level at which some plants cannot preserve stress conditions in the absence of their endophytic microbes (Alsaggaf et al. 2020; de Zelicourt et al. 2013; El-Mekay et al. 2013, El-Baz et al. 2011b; El-Sayed et al. 2010, 2012). A growing interest in symptomless parasitic fungi ‘endophytes’ since the discovery of paclitaxel (Taxol, anticancer drug), from Pestalotiopsis microspora, a endophytic fungus that lives internally in the Himalayan yew tree Taxus wallichiana, without causing injury to its host plant (Maheshwari 2006). As well as, several fungal endophytes namely A. flavipes, A. terreus inhabiting Podocarpus gracilior were reported as potent Taxol producers, without any effect diseases symptoms on the plant (El-Sayed et al. 2015e, 2019a, 2019b, 2020, 2021). Also, Penicillium polonicum as endophyte of Ginko piloba were reported as potent Taxol producers without any apparent effect on the plant heath (Abdel-Fatah et al. 2021). The endophytic fungus Aspergillus fumigatus of Vinca was reported for first time as Epothilones producer without any undesirable effect on the plant health (El-Sayed et al. 2021; El-Sayed et al. 2015a, 2015b, 2015c, 2015d, 2015e, 2016, 2019a). The potency of endophytic fungi for inhabiting various medicinal plant for production of diverse bioactive compounds were extensively studied (El-Sayed et al. 2020a, 2020b, 2021). They lives entirely in the plant tissues for whole or small part of their life cycle and cause no apparent infections and may grow inside the roots, stems and/or leaves, tending to forms spores with aging of their host-tissue (El-Sayed, 2009; Hallmann and Sikora 2011; Maheshwari 2006; Mishra et al. 2014).

Table 1 Common priming techniques and the agents utilized in each case

Priming ConceptPriming technique
Osmopriming/osmotic priming haloprimingImmersion of the seeds in an osmotic solution of water with a low potential, rather than pure water.
Priming agents: Polyethylene glycol (PEG), mannitol, sorbitol, glycerol, and inorganic salts, such as sodium chloride (NaCl), potassium chloride (KCl), potassium nitrate (KNO3), potassium phosphate (K3PO4), and calcium chloride (CaCl2).
Solid matrix priming (SMP)/solid primingThe seeds are mixed with a solid matrix (organic or inorganic) capable of adjusting the moisture content and controlling the uptake of water.
Priming agents: Vermiculite, peat moss, charcoal, sand, clay
HormoprimingThe seeds are soaked in water with plant growth regulators and hormones, leading to an enhancement of seed germination.
Priming agents: Abscisic acid (ABA), auxins (AU), gibberellins (GAs), kinetin, ethylene, polyamines, and salicylic acid (SA).
ThermoprimingPre-sowing seeds at different temperatures is referred to as thermopriming.
Priming agent: Low temperatures or high temperatures.
ChemoprimingThe seeds are soaked in different chemical solutions.
Priming agents: Ascorbic acid, glutathione, tocopherol, melatonin, and proline, H2O2, sodium nitroprusside, urea, thiourea, mannose, chitosan, fungicides, etc.
Hydropriming/On-farm primingThe seeds are soaked in sterilized distilled water and then re-dried using air to their original case.
Priming agent: Sterilized distilled water
Biopriming/biological seed treatmentA combination of seed hydration by soaking; then, the seeds can be inoculated with beneficial microbes.
Priming agents: Beneficial microbes

Fungal endophytes can affect both of plant growth and its responses to different factors as pathogenic organisms, grazing animals and environmental stresses through their ability to produce beneficial metabolites (Abdella et al. 2018a, 2018b; Abdel-Monem et al. 2012; Porras-Alfaro and Bayman 2011). Endophytic fungi can be classified into two groups depending on their food uptake strategies: (1) facultative endophytes (obtaining their food from living and non-living dead organic matter), and (2) obligate endophytes (obtaining their food from living plant cells only) (Hallmann and Sikora 2011). Recently, by molecular analysis it was suggested that endophytic fungi can colonize the green plants by before plants colonized the land, by establishing a close contact (intercellularly and intracellularly) with the plant cells (Maheshwari 2006). Endophytes can supress the defence mechanism of plants to prevent the pathogen attack to the plant depending on the way used by plants to detect the pathogens and endophytes as the plant uses the same set of genes (Maheshwari 2006).

Successful endophytic colonization undergoes numerous significant steps: finding the host plant, surface colonization of the plant and invasion of the internal tissue in plant. Some factors ease the entrance process of endophytic microbes to the plant tissues includes natural factors such as hydathodes, stomata and lenticels, and artificial factors as wounds caused by physical factors. Penetration of microbes to the cuticle surface and cell walls requires secretion of cell wall-degrading enzymes like cutinase, pectinase, cellulase, hemicellulase, protease and lignin-peroxidases. Plant endophytes can easily transmitted from one generation to another through plant seeds (Lata et al. 2018). To show whether Piriformospora indica infested plants would be more resistant to biotic stress or not, the barley was grown in soil infected with macroconidia of Fusarium culmorum a necrotrophic fungal pathogen (Waller et al. 2005). They found that fresh weight of shoot and root was decreased by two folds in plants infested with P. indica comparing to 12-fold reduction in controls with F. culmorum alone. Kannadan and Rudgers (2008). found that fungal endophyte Neotyphodium sp symbiosis positively affects the survival and growth of grove bluegrass ‘Poa alsodes’ under altered water availability. It was reported that under water-limitation stress for grove bluegrass, two treatments were used the first disinfected plants and the second endophyte-harbouring plants and the result showed that disinfected plants had bigger leaf aging than endophyte-harbouring plants, showing the positive role of endophytes symbiosis in amelioration the negative drought stress effects (Kannadan and Rudgers 2008). In another work, Song et al. (2015) demonstrated that Epichlё sp. endophyte infected wild barley plants producing significantly higher content of chlorophyll in leaves, high lengths of roots and shoots and higher plant biomass comparing to plants free of endophytes under waterlogging stress. They also had more proline production, low content of malondialdehyde and low leakage of electrolyte, meaning that the endophytic microbe alleviated the damage in waterlogged barley host plants.

In terms of investigating the role of fungal endophytes in ameliorating the heavy metal stressor, Yamaji et al. (2016) found that in absence Clethra barbinervis (root endophytic fungus), could hardly grow under the high levels of heavy-metal, showing chlorosis. Waqas et al. (2015) reported that endophytic association of Paecilomyces formosus without any stress and increase heat stress conditions significantly, enhanced the growth of japonica and resulted in an increase in height, fresh and dry weight, and plant content of chlorophyll. P. formosus also increased the total protein content and lowered endogenous level of stress-signalling compounds such as jasmonic and abscisic acid and finally protected the rice plants from heat stress comparing to the controls. Redman et al. (2011) assessed the ability of Curvularia protuberata to confer cold tolerance to rice plants (below 20°C). Results showed that symbiotic seedlings had development (appearance of roots and shoot) frequencies of greater than 90% at all of the temperatures tested. In agreement with the studies above, some other works showed the positive impact of fungal endophytes on salt-stressed plants as well. For instance, Ahmad et al. (2015) showed that adding of Trichoderma harzianum to NaCl treated mustard “Brassica juncea” seedlings showed enhancement in lengths of root and shoot, plant dry weight, pigment and proline contents, SOD, POD, APX, GR, GST, GPX, GSH, and GSSG comparing to plants treated with sodium chloride (200 mM) alone. Also, a decrease in the accumulation of both hydrogen peroxide and MDA was reported by adding of T. harzianum to NaCl fed mustard seedlings. The effect of moderate (100 mM NaCl) salt stress was abolished completely by Piriformospora indica, as reported the infested plants produced large biomass than produced by control (non-stressed) plants under the same condition conditions (Waller et al. 2005). Similarly, while working with barely, it has been reported recently that the endophytic fungus Epichloë bromicola might help the Hordeum brevisubulatum plants to stand salt stress by stimulating the conversion of putrescine to spermine and spermidine, as well as shifting the ability of polyamines free and soluble conjugated forms to its bound insoluble forms (Chen et al. 2019).

Plants adaptation to stress follow two mechanisms: (1) activation of stress response systems in the host quickly after exposure to stress, and (2) secondary metabolites biosynthesis (anti-stress compound) by endophytic microbes (Lata et al. 2018; Singh et al. 2011). Plant hormones works as central connector that link and reprogram the complex development and stress adaptation signalling cascades (Golldack et al. 2014). In this section we will consider how phytohormones come into play to avoid salt injury. In a study, on two rice varieties differ in their sensitivity to salt, growth reprogramming and building up of an adaptation program leading to specific responses (morphological and physiological) and growth yield under salt stress was backed to the speed of hormonal metabolism regulation in the tolerant variety (Formentin et al. 2018; Patel et al. 2016). The plant growth and development are mainly regulated by auxins. different studies showed the role of auxin in plants response to salinity stress, but unfortunately, there is no enough available information about auxin mechanisms in salt stress regulation (Fahad et al. 2015; Ryu and Cho 2015). It has been reported that auxin-induced mitigation of the salinity effects of on maize plants was linked with the increment in the concentration of photosynthetic pigments and leaf sodium/potassium ratio and the reduction in membrane permeability (Kaya et al. 2013). Overexpression of TaSAUR75, small auxin upregulated RNAs (SAURs), was regulated by auxin and different environmental factors, intensified drought and salt adaptation in Arabidopsis. Genetically modified plant lines displayed higher length of root and survival rate and the expression of some stress-response genes was high than that of control plants (Guo et al. 2018).

Gibberellins are important for plants during their life cycle for growth-stimulation purpose (Wani et al. 2016). During plants exposure to salinity stress a rapid accumulation of gibberellic acid (GA) will occur (Kaya et al. 2009). In a study conducted by (Iqbal and Ashraf 2013), induced increase in grain yield was linked to the gibberellins-priming stimulated modulation of ions uptake under salinity stress. Similarly, while working with Olea europaea, researchers found that using gibberellin via reducing the concentrations of sodium and chloride in olive plants, but increasing the amount of potassium chlorophyll and proline (Shekafandeh et al. 2017).

Cytokinins (CKs) achive abiotic stress adaptation in higher plants, may be through modulating various components of the photosynthetic machinery under abiotic stress conditions (Fahad et al. 2015; Gururani et al. 2015). A transcriptomic analysis showed that under salt stress, CK triggered transcriptional reprograming in Arabidopsis leaves that resulted in decreasing stress-dependent inhibition of vegetative growth and reduce premature plant aging (Golan, et al. 2017). Ma et al. (2016) showed that using of 6-benzylaminopurine alleviated the bad effects caused by salt stress in Perennial ryegrass by increasing the ability of enzymes associated with reactive oxygen species scavenging and suppression of sodium ion accumulation to keep a higher potassium/ sodium ratio attributed to the increased high-affinity K+ transporter expression.

Accumulation of abscisic acid can alleviate the bad effect of salt stress on growth, photosynthesis, and translocation. High levels of abscisic acid hormone aids plants to grow under low water content by closing stomatal openings and accumulates virous proteins and osmoprotective agents for osmotic control (Gupta and Huang 2014; Ryu and Cho 2015). The Arabidopsis abscisic acid -deficient mutants, aba1-3, died after exposure to higher salt concentration, implying that ABA provides a protective role in higher salt concentration (Cramer 2002). In a study, on rice, researchers reported the implication of ABA in the control of salt-induced cellular mechanisms resulting in sodium ion defamation from the cytoplasm (Pons et al. 2013).

Foliar spray of salt stressed-soybean with salicylic acid (SA) led to significant increase in chlorophyll, sugar, starch and proline contents, indicating that application of SA can overcome salinity (Jaiswal et al. 2014). Treatment of salicylic acid to saline soils enhanced also the salt tolerance in rice plants via less accumulation of sodium and chlorine ions, an increased concentration of endogenous SA level and augmented antioxidant enzymes such as superoxide dismutase, catalase and peroxidase (Jini and Joseph 2017; Khan et al. 2017). The cyclopentanone is a phytohormones produced from the metabolism of membrane fatty acids as jasmonates (methyl jasmonate (MeJA) and jasmonic acid) can activate the defence mechanisms of plant in response to wounding caused by insect, pathogenic organisms, and environmental stresses, such as drought, low or high temperature, and salts (Mann et al. 2015; Wani et al. 2016). OsJAZ9 is a member of the JAZ subfamily that belonging to the TIFY gene family in rice “Oryza sativa”, suppression of this gene resulted in reduction of salt tolerance. The altered salt adaptation was mainly due to changes in homeostasis of ion (especially K+), which was proved by the different expression levels of several ion transporters (Wu et al. 2015). Zhao et al. (2014), reported that salinity-response gene in bread wheat (TaAOC1 gene), encoding allene oxide cyclase involved in the metabolic pathway of α-linolenic acid, was highly expressed in both Arabidopsis and bread wheat. In both species, genetically modified lines showed an enhanced level of adaptation to salt (Zhao et al. 2014).

Different groups of organisms, such as fungi, bacteria, and plants are harbouring soils. Plant roots are the richest place colonized by microorganisms (compared to soil and other habitats) because of root exudates which are rich with nutrients. The rhizosphere area attracts different microbes that utilize the different nutrients released in the root exudates. Hence, these microbes plays an effective role in nutrition uptake and development and growth by producing biologically active secondary metabolites, as phytohormones (auxins, cytokinins, gibberellins and abscisic acid), and antimicrobial compounds. Also, they can increase plant resistance to different factors of biotic and abiotic stress, enhancing nutrient uptake and protect plants from different pathogenic soil-borne microbes (Egamberdieva et al. 2017). Microbes adopt their ability for synthesizing phytohormone in the rhizosphere for improving both plant growth and stress resistance. In plant tissue, microbial phytohormones affect the metabolic pathway of endogenous growth regulators and it are a limiting factor in changing root morphology upon exposure to different stresses as drought, salt, low and high temperature and toxicity of heavy metal (Chakraborty et al. 2015; Egamberdieva et al. 2017). For example, Bastías et al. (2018) indicated the important role of salicylic acid a in regulating the acquired resistance by endophyte against herbivores. In addition, the culture application and endophytic-association of Phoma glomerata and Penicillium sp. significantly reprogrammed the growth of host cucumber plants during salt and drought stress conditions by means of secreting gibberellins and indole acetic acid (Waqas et al. 2012). Kang et al. (2014) found that the endogenous SA and GA4 contents were significantly higher in B. cepacia, A. calcoaceticus and Promicromonospora sp inoculated plants than non-inoculated cucumbers under both salinity and drought stresses.

Iqbal et al. (2016) showed that inoculation of maize with auxin producing rhizobacterial stains enhanced grain yield, fresh biomass and grains contents of phosphorous under saline field conditions. Results of Khan et al. (2012) revealed that upon salinity stress Paecilomyces formosus, a GAs and indole acetic acid secreting fungal strain, inoculation higher endogenous gibberellins (GA3, GA4, GA12 and GA20) contents in the tissue of cucumber plants which resulted in salinity stress modulation. Penicillium janthinellum association helped Sitiens plants, tomato abscisic acid (ABA)-deficient mutants, that had reduced the growth under normal and salt stress to synthesis significantly higher abscisic acid to modulate stress responses (Khan et al. 2013; Selvakumar et al. 2014).

A study by Sajjad Asaf and colleagues reported that the combined treatment of soybean plants with Sphingomonas sp. along with trehalose imporoved endogenous jasmonic (JA) and abscisic (ABA) acid contents and allivated the negative effects of osmotic stress induced by drought (Asaf et al. 2017; Maamoun et al. 2021). It has also been reported that most of the alfalfa plants inoculated with engineered Sinorhizobium strains which overproducing zeatins survived under severe drought stress and the no apparent change for nitrogenase activity in their root nodules was reported (Rodriguez et al. 2009; Xu et al. 2012).

In conclusion, preceding data presented in this review underpin the view that seed biopriming approach is a promising pre-sowing treatment conferring better tolerance to plants against diverse abiotic stressors. Steering research on fungal biopriming under salt stresses will help to enhance our knowledge and understanding of the action mechanisms adopted by fungal endophytes to reach to salinity tolerance in host plants.

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Article

Review

J Plant Biotechnol 2022; 49(2): 107-117

Published online June 30, 2022 https://doi.org/10.5010/JPB.2022.49.2.107

Copyright © The Korean Society of Plant Biotechnology.

Fungal biopriming increases the resistance of wheat to abiotic stress

Ashraf S. A. El-Sayed ・Hanan E. Dief ・ElSayed A. Hashem ・Ahmed M. Desouky ・Zamarud Shah ・Salwa Fawzan

Enzymology and Fungal Biotechnology Lab, Botany and Microbiology Department, Faculty of Science, Zagazig University, Zagazig, 44519, Egypt
STEM School, Al-Sharqia, Zagazig
Department of Biotechnology, University of Science and Technology, Bannu, Khyber, Pakhtunkhwa, Pakistan

Correspondence to:e-mail: ashrafsabry@zu.edu.eg

Received: 20 November 2021; Revised: 21 December 2021; Accepted: 21 December 2021

This is an Open-Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

Abstract

Increasing soil salinity is one of the global challenges that the agriculture sector in Egypt has been facing; 33% of the cultivated land in Egypt, which includes merely 3% of the entire land area, is already salinized. The present review sheds light on the role of fungal biopriming, a technique in which hydrated seeds are inoculated with beneficial fungal flora, in mitigating the deleterious influence of NaCl tension. Endophytic fungi were recognized to be able to interact with several plant species, markedly contributing to the mitigation of NaCl stress in these plants, such that some plants get impoverished to their absent associated microbes under stressful conditions.

Keywords: Fungal biopriming, Abiotic stress, Wheat salt stress

Introduction

Seed priming approaches were initially nominating for alleviating the plant environmental stresses. Several approaches of priming were reported such as hydropriming, osmopriming, hormopriming, thermopriming, nutripriming, chemical priming and biopriming (Heydecker et al. 1973; Lutts et al. 2016). Compiling the process of seeds hydration and microbial inoculation using beneficial microbes has been nominated as biological priming “biopriming”. It plays vital roles in increasing seed viability, germination so, enhancing the growth of plant and also, decrease other stresses on the plant (Afzal et al. 2016; Lutts et al. 2016). The fungal endophytes are able to interplay with plants and significantly participate in their tolerance to different forms of both stresses (biotic and abiotic) such as salinity, heat, drought, plant pathogens, herbivores, shortage of elements of nutrition to great limit that some plants get impoverished to their absent associated microbes under stressful conditions (de Zelicourt et al. 2013; El-Sayed et al. 2019). Stress control by phytosymbiotic are mainly occurred by stimulation of systems responsible for stress in the host cell, and anti-stress compounds produced by endophytes. These phytohormones could promotes the root hairs growth by increasing the total area of root, ease the nutrients uptake, inducing the activity of 1-aminocyclopropane-1-carboxylate deaminasee (Lata et al. 2018; Milošević et al. 2012; Prasad et al. 2016; Singh et al. 2011; Vardharajula et al. 2017).

Salt Stress

Agriculture is the prime activity for the Egyptian population, however, degradation of soils through salinity was the major agricultural problem. Soils in the Nile Delta are affected by different types of salts comes from three distinct sources named logging, water irrigation, and the interruption of saline water. Salinity can affect the uptake of nutrients and water absorption as well as the permeability of cell membranes, and this appears clearly by the balance water and nutrients, and mutually effect the metabolic process in the plant, hormones production, exchange of gases, and the accumulation of reactive oxygen species (ROS) (Gheyi et al. 2016). Visual signs of salt harm in plant growth seem progressive: wilting, leaves yellowing and abnormal growth, followed by losing of green colour and appearance pf chlorotic lesion on the green parts, burning of the upper parts of leaves, and necrotic lesions on the leaves, then finally, the oldest leaves takes the scorched appearance (Machado and Serralheiro 2017). Salinity decreases the plant growth because owing to salinity the plant may face four types of stresses firstly, water stress induced by osmosis. Secondly, the ion toxicity stress because of the high ions concentrations as sodium and chloride. Thirdly, the imbalance ions nutrients, because higher levels of sodium and chloride can decrease the uptake of other ions as K+, NO-, PO43-. Fourthly, the stress caused by high production of ROS which causes macromolecules damage.

Soil salinity diminishes the net photosynthetic process by decreasing the stomatal conductance, CO2 pressure in leaves, and cell content of chlorophyll, altering the structure of chloroplasts, decreasing the photo dependent chemical reactions, and increasing the tissues content of soluble sugars (Iqbal et al. 2014). Osmoregulants (proline, protein, mannitol, sorbitol, glycine and betaine) build up in salt stressed plants to reduce the osmotic potential, thereby maintaining cell turgidity that provides in turn the driving gradients for uptake of water (Rasool et al. 2013). The main cations associated with salinity are usually sodium, calcium and magnesium, while the main anions associated with salinity were Cl-, SO4-2 and HCO3- (Yadav et al. 2011). Plants are either glycophytes or halophytes depending on their potency for growing on different concentrations of salt. Halophytes are completely grows on steep dose of salt, Atriplex nummularia (a saltbush). A lot of the terrestrial plants are classified as glycophytic with low tolerance to salt high concentrations (Rasool et al. 2013). Plants with salt sensitivity and tolerance are differs in the speed of progression of salt toxicity, may be days or weeks or months, relying on the species of plant and salinity degree, is the timescale (Carillo et al. 2011). To study the effects of osmotic and ionic salt stress, (Munns et al. 1995) proposed a model of two-phase in which the first, osmotic phase, which commence instantly (within minutes) after the accumulation of salt near the roots increases to a threshold level which is nearly 40 mM of sodium chloride for most plants, or less in plants sensitive for salt such as Arabidopsis and rice, leading to a significant reduction in shoot growth because the root system hardly gets the needed water and also, due to a loss of cell wall extensibility (Läuchli and Grattan 2007; Le Gall et al. 2015; Munns and Tester 2008; Tilbrook and Roy 2013).

Ion-specific, the second phase, is the stage at which plants respond to salinity (in days, weeks or months): salt accumulation in old leaves reaches to its toxic concentrations (which in turn stop their growth and prevent the dilution of salt arrives to them as occur in younger leaves) leading to their death, the inescapable destiny. If the death rate exceeds the production rate of new leaves, the photosynthesis process of the plant will not be able to cover carbohydrate demand of the newly growing leaves, which subsequently decreases the rate of their growth (Läuchli and Grattan 2007; Munns and Tester 2008).

Pre-Sowing Seed Treatment

Different methods were used from past to present trying to adapt to different stresses, including traditional methods of breeding “hybridization and selection” and modern technologies as “mutation, polyploidy breeding and genome editing” (Jisha et al. 2013). Genetic engineering possesses in a reasonable manner being the affordable method due to the incorporation of targets, and heterologous traits to the elite crop lines. However, these methods are expensive, cumbersome requiring biosafety regulations that hinders the implementation of transgenic plants to the field (Jisha et al. 2013). The alternative solution would be more affordable, cost effective and can be adopted without complications (Jisha et al. 2013). Different research has been done to decrease the time between planting to development as this plays a fundamental role in the production of different crops. Seed priming technique is one of the results these researches. This technique was proposed for the first time by (Heydecker et al. 1973). Priming technique is an effective method for enhancing the quality of seed, increasing the rates for germination resulting in high resistance levels of stress and high yields production, improving the product competitiveness, correlating to seed vigour, that limited by various genetic and environmental traits (Paparella et al. 2015).

Priming of seeds is a pre-sowing of seeds by exposing to particular solutions for a specific time that enables partial entrance of water before emerging of radicle. When a dry non-dormant seeds were kept in water, imbibition, lag phase, and appearance of the radicle by the testa follows one another during the process of germination (Dalil 2014; Lutts et al. 2016; Singh et al. 2015). During priming the water supply to the seed is a limiting step, because it makes the level of seed moisture below its required level for exact germination. At this level the physiological processes controlling the pre-germination metabolism can be started but the transition of seed towards its full germination is prevented. This precludes seeds from going through the third phase of hydration (growth) by stretching and detaining seeds within the lag phase (activation) (Ibrahim 2016; Singh et al. 2015). Being desiccation-tolerant, seeds have to be re-dried again to its initial content of moisture before radicle emergence to preserve the benefits of the priming method (Ibrahim 2016; Mondal and Bose 2014). The seed should be dried at imbibition phase (I) or activation (II), but growth phase III is an advanced phase allowing re-drying keeping the seed quality. Post-radicle emergence seed dehydration leads to seed vigour damage and losing seed viability. Life expectancy of primed seeds is usually long on condition of a successful drying-back and storage (Ibrahim 2016; Paparella et al. 2015).

Numerous factors affect priming efficiency and extremely relies on types of plant species and priming technique, namely osmotic, water potential, priming agent, duration, light, aeration, and seed type. All of these factors plays an important role in priming success and germination requriments (Lutts et al. 2016). The common priming techniques include hydropriming, osmopriming, hormopriming, thermopriming, chemopriming, and biopriming. Using osmotic solution with low water potential to soak the seeds in is known as osmopriming. The low potential of water used in the osmotic solutions, enables water to enter into seed slowly allowing the gradual activation of germination phases without occurrence of radicle emergence (Jisha et al. 2013; Lutts et al. 2016; Paparella et al. 2015).

In priming by solid matrix (matriconditioning), solid or semi-solid matrix has been used replacing the liquid one (Jisha et al. 2013). Solid priming has been emerged as an alternative approach of osmopriming because of the high price and technical problems of osmopriming. In contrast to osmopriming in which liquid solutions (liquid priming) are used, in solid priming, a solid matrix is to coat the seeds, due its ability to adjust the moisture content and controlling water uptake (Fig. 1). This solid matrix allows slowly hydration of seeds (Jisha et al. 2013; Lutts et al. 2016; Paparella et al. 2015). We can improve the seed germination of different crops by adding hormones and PGPR during priming process (Jisha et al. 2013). For example in hormopriming different regulators are used as ABA, auxins, GAs, polyamines, and SA (Lutts et al. 2016). Pre-sowing seeds at different temperatures is referred to as thermopriming, generally, the best results can be achieved at low temperatures. Although in some species priming with higher temperatures is preferable and gives a good germination results mainly for crops growing in warm climates (Paparella et al. 2015).

Figure 1. The common recommended method for seed bio-priming

Chemopriming is the process in which seeds are treated with various chemicals before its germination. The priming process in this case can use different compounds (natural or synthetic) some of these compounds are ascorbic acid, urea, chitosan, sodium nitroprusside, and so on (Jisha et al. 2013; Lutts et al. 2016). In nutripriming, seeds were soaked in water containing different limiting nutrients instead of water alone. This method prove the important role of mineral nutrition in increasing the plant resistance to different types of stress (Jisha et al. 2013; Lutts et al. 2016).

In hydropriming, soaking the seeds in water (distilled and sterilized) at room temperature (in a range from 5 to 20°C) till hydration level in seeds equal to 10-20% of full absorption. As mentioned, it is important to dry the seeds soaked to their initial weights with air (Jisha et al. 2013; Paparella et al. 2015). Biopriming is the process in which seed hydration by soaking in water containing beneficial microbes, thus improving the viability of seed, germination rate, plant growth, protecting the plants from the diseases (microbial or physiological). Immersion of the seeds for 12 h in water, is the recommended method of biopriming. The formulated of the microorganisms were added to the seeds (pre-immersed) at the level of 10 g/kg of the crop seeds and mixed with each other. The seeds were collected in polythene bags, and to maintain high level of humidity, the bags were covered with moist jute sack for two days at 30°C, allowing to the adherence biological agent to the seeds surface making a protective layer surrounding the seed coat (Afzal et al. 2016; Lutts et al. 2016; Prasad et al. 2016).

Role of Biopriming in Salt Stress Resilience

Several reports document that plants can better withstand salt stress by seed biopriming approach. Biopriming of durum wheat grains with Bacillus pumilus, Virgibacillus sp., B. pumilus, and B. tequilensis gave the highest protection against Fusarium disease, promote the plant growth, and salinity adaptation (Feto et al. 2019). Seed biopriming of rice (Oryza sativa) with five salinity adaptive isolates of Trichoderma harzianum gave a significant increase in length of shoot and root, leaves number, leaf area, rate of photosynthesis process, leaf content of chlorophyll and plant fresh weight comparing to salt stressed control plant (Rawat et al. 2012). Effect of Trichoderma lixii on Zea mays as a seed fungal biopriming agent was studied under sodium chloride stress. Authors observed a decrease amount of both hydrogen peroxide and MDA along with an increase in the content of soluble protein and proline (Pehlivan et al. 2017). Biopriming of Seeds using Pseudomonas geniculate (salt tolerant endophyte) caused a growth promotion and mitigated the salt stress in Zea mays. Application of P. geniculate reduced the sodium uptake and increased the uptake of potassium and calcium in the roots of maize showing its role in controlling the ionic balance/homeostasis in the roots of maize under high salt stresses (Singh et al. 2020). Several studies studied the ability of five salinity tolerant isolates of T. harzianum applied via seed biopriming by attenuating the severity of salinity on wheat (Triticum aestivum L.). Fungal biopriming resulted in improved germination percentage, lengths of shoot and root systems, leaves content of chlorophyll and membrane stability index than control at all salt stress levels (Rawat et al. 2011). Biopriming of Brassica napus (canola) seeds using B. subtilis and Macrophomina phaseolina could enhance the germination index and alleviates the effects of salinity (Mousavi and Omidi 2019). Researchers should thereby study more to show the impact of seed biopriming with microbial inoculants on the removal of environmental stresses.

Stress Tolerance in Plants via Fungal Neighbours

Plants lives in close association with the microorganisms either as neighbours in the soil, or especially those microorganisms lives internally in plants as endophytes (El-Baz et al. 2011a; El-Baz et al. 2017, 2018; Hardoim et al. 2015). endophytic fungi can interact with many species and hence cause a significant contribution in the plant adaptation to different environmental stresses such as drought, heat, pathogens infect, insects infection, or nutrients limitation to the level at which some plants cannot preserve stress conditions in the absence of their endophytic microbes (Alsaggaf et al. 2020; de Zelicourt et al. 2013; El-Mekay et al. 2013, El-Baz et al. 2011b; El-Sayed et al. 2010, 2012). A growing interest in symptomless parasitic fungi ‘endophytes’ since the discovery of paclitaxel (Taxol, anticancer drug), from Pestalotiopsis microspora, a endophytic fungus that lives internally in the Himalayan yew tree Taxus wallichiana, without causing injury to its host plant (Maheshwari 2006). As well as, several fungal endophytes namely A. flavipes, A. terreus inhabiting Podocarpus gracilior were reported as potent Taxol producers, without any effect diseases symptoms on the plant (El-Sayed et al. 2015e, 2019a, 2019b, 2020, 2021). Also, Penicillium polonicum as endophyte of Ginko piloba were reported as potent Taxol producers without any apparent effect on the plant heath (Abdel-Fatah et al. 2021). The endophytic fungus Aspergillus fumigatus of Vinca was reported for first time as Epothilones producer without any undesirable effect on the plant health (El-Sayed et al. 2021; El-Sayed et al. 2015a, 2015b, 2015c, 2015d, 2015e, 2016, 2019a). The potency of endophytic fungi for inhabiting various medicinal plant for production of diverse bioactive compounds were extensively studied (El-Sayed et al. 2020a, 2020b, 2021). They lives entirely in the plant tissues for whole or small part of their life cycle and cause no apparent infections and may grow inside the roots, stems and/or leaves, tending to forms spores with aging of their host-tissue (El-Sayed, 2009; Hallmann and Sikora 2011; Maheshwari 2006; Mishra et al. 2014).

Table 1 . Common priming techniques and the agents utilized in each case.

Priming ConceptPriming technique
Osmopriming/osmotic priming haloprimingImmersion of the seeds in an osmotic solution of water with a low potential, rather than pure water.
Priming agents: Polyethylene glycol (PEG), mannitol, sorbitol, glycerol, and inorganic salts, such as sodium chloride (NaCl), potassium chloride (KCl), potassium nitrate (KNO3), potassium phosphate (K3PO4), and calcium chloride (CaCl2).
Solid matrix priming (SMP)/solid primingThe seeds are mixed with a solid matrix (organic or inorganic) capable of adjusting the moisture content and controlling the uptake of water.
Priming agents: Vermiculite, peat moss, charcoal, sand, clay
HormoprimingThe seeds are soaked in water with plant growth regulators and hormones, leading to an enhancement of seed germination.
Priming agents: Abscisic acid (ABA), auxins (AU), gibberellins (GAs), kinetin, ethylene, polyamines, and salicylic acid (SA).
ThermoprimingPre-sowing seeds at different temperatures is referred to as thermopriming.
Priming agent: Low temperatures or high temperatures.
ChemoprimingThe seeds are soaked in different chemical solutions.
Priming agents: Ascorbic acid, glutathione, tocopherol, melatonin, and proline, H2O2, sodium nitroprusside, urea, thiourea, mannose, chitosan, fungicides, etc.
Hydropriming/On-farm primingThe seeds are soaked in sterilized distilled water and then re-dried using air to their original case.
Priming agent: Sterilized distilled water
Biopriming/biological seed treatmentA combination of seed hydration by soaking; then, the seeds can be inoculated with beneficial microbes.
Priming agents: Beneficial microbes

Fungal endophytes can affect both of plant growth and its responses to different factors as pathogenic organisms, grazing animals and environmental stresses through their ability to produce beneficial metabolites (Abdella et al. 2018a, 2018b; Abdel-Monem et al. 2012; Porras-Alfaro and Bayman 2011). Endophytic fungi can be classified into two groups depending on their food uptake strategies: (1) facultative endophytes (obtaining their food from living and non-living dead organic matter), and (2) obligate endophytes (obtaining their food from living plant cells only) (Hallmann and Sikora 2011). Recently, by molecular analysis it was suggested that endophytic fungi can colonize the green plants by before plants colonized the land, by establishing a close contact (intercellularly and intracellularly) with the plant cells (Maheshwari 2006). Endophytes can supress the defence mechanism of plants to prevent the pathogen attack to the plant depending on the way used by plants to detect the pathogens and endophytes as the plant uses the same set of genes (Maheshwari 2006).

Successful endophytic colonization undergoes numerous significant steps: finding the host plant, surface colonization of the plant and invasion of the internal tissue in plant. Some factors ease the entrance process of endophytic microbes to the plant tissues includes natural factors such as hydathodes, stomata and lenticels, and artificial factors as wounds caused by physical factors. Penetration of microbes to the cuticle surface and cell walls requires secretion of cell wall-degrading enzymes like cutinase, pectinase, cellulase, hemicellulase, protease and lignin-peroxidases. Plant endophytes can easily transmitted from one generation to another through plant seeds (Lata et al. 2018). To show whether Piriformospora indica infested plants would be more resistant to biotic stress or not, the barley was grown in soil infected with macroconidia of Fusarium culmorum a necrotrophic fungal pathogen (Waller et al. 2005). They found that fresh weight of shoot and root was decreased by two folds in plants infested with P. indica comparing to 12-fold reduction in controls with F. culmorum alone. Kannadan and Rudgers (2008). found that fungal endophyte Neotyphodium sp symbiosis positively affects the survival and growth of grove bluegrass ‘Poa alsodes’ under altered water availability. It was reported that under water-limitation stress for grove bluegrass, two treatments were used the first disinfected plants and the second endophyte-harbouring plants and the result showed that disinfected plants had bigger leaf aging than endophyte-harbouring plants, showing the positive role of endophytes symbiosis in amelioration the negative drought stress effects (Kannadan and Rudgers 2008). In another work, Song et al. (2015) demonstrated that Epichlё sp. endophyte infected wild barley plants producing significantly higher content of chlorophyll in leaves, high lengths of roots and shoots and higher plant biomass comparing to plants free of endophytes under waterlogging stress. They also had more proline production, low content of malondialdehyde and low leakage of electrolyte, meaning that the endophytic microbe alleviated the damage in waterlogged barley host plants.

In terms of investigating the role of fungal endophytes in ameliorating the heavy metal stressor, Yamaji et al. (2016) found that in absence Clethra barbinervis (root endophytic fungus), could hardly grow under the high levels of heavy-metal, showing chlorosis. Waqas et al. (2015) reported that endophytic association of Paecilomyces formosus without any stress and increase heat stress conditions significantly, enhanced the growth of japonica and resulted in an increase in height, fresh and dry weight, and plant content of chlorophyll. P. formosus also increased the total protein content and lowered endogenous level of stress-signalling compounds such as jasmonic and abscisic acid and finally protected the rice plants from heat stress comparing to the controls. Redman et al. (2011) assessed the ability of Curvularia protuberata to confer cold tolerance to rice plants (below 20°C). Results showed that symbiotic seedlings had development (appearance of roots and shoot) frequencies of greater than 90% at all of the temperatures tested. In agreement with the studies above, some other works showed the positive impact of fungal endophytes on salt-stressed plants as well. For instance, Ahmad et al. (2015) showed that adding of Trichoderma harzianum to NaCl treated mustard “Brassica juncea” seedlings showed enhancement in lengths of root and shoot, plant dry weight, pigment and proline contents, SOD, POD, APX, GR, GST, GPX, GSH, and GSSG comparing to plants treated with sodium chloride (200 mM) alone. Also, a decrease in the accumulation of both hydrogen peroxide and MDA was reported by adding of T. harzianum to NaCl fed mustard seedlings. The effect of moderate (100 mM NaCl) salt stress was abolished completely by Piriformospora indica, as reported the infested plants produced large biomass than produced by control (non-stressed) plants under the same condition conditions (Waller et al. 2005). Similarly, while working with barely, it has been reported recently that the endophytic fungus Epichloë bromicola might help the Hordeum brevisubulatum plants to stand salt stress by stimulating the conversion of putrescine to spermine and spermidine, as well as shifting the ability of polyamines free and soluble conjugated forms to its bound insoluble forms (Chen et al. 2019).

Phytohormones: Alleviation Mechanism adopted by Endophytic Fungi

Plants adaptation to stress follow two mechanisms: (1) activation of stress response systems in the host quickly after exposure to stress, and (2) secondary metabolites biosynthesis (anti-stress compound) by endophytic microbes (Lata et al. 2018; Singh et al. 2011). Plant hormones works as central connector that link and reprogram the complex development and stress adaptation signalling cascades (Golldack et al. 2014). In this section we will consider how phytohormones come into play to avoid salt injury. In a study, on two rice varieties differ in their sensitivity to salt, growth reprogramming and building up of an adaptation program leading to specific responses (morphological and physiological) and growth yield under salt stress was backed to the speed of hormonal metabolism regulation in the tolerant variety (Formentin et al. 2018; Patel et al. 2016). The plant growth and development are mainly regulated by auxins. different studies showed the role of auxin in plants response to salinity stress, but unfortunately, there is no enough available information about auxin mechanisms in salt stress regulation (Fahad et al. 2015; Ryu and Cho 2015). It has been reported that auxin-induced mitigation of the salinity effects of on maize plants was linked with the increment in the concentration of photosynthetic pigments and leaf sodium/potassium ratio and the reduction in membrane permeability (Kaya et al. 2013). Overexpression of TaSAUR75, small auxin upregulated RNAs (SAURs), was regulated by auxin and different environmental factors, intensified drought and salt adaptation in Arabidopsis. Genetically modified plant lines displayed higher length of root and survival rate and the expression of some stress-response genes was high than that of control plants (Guo et al. 2018).

Gibberellins are important for plants during their life cycle for growth-stimulation purpose (Wani et al. 2016). During plants exposure to salinity stress a rapid accumulation of gibberellic acid (GA) will occur (Kaya et al. 2009). In a study conducted by (Iqbal and Ashraf 2013), induced increase in grain yield was linked to the gibberellins-priming stimulated modulation of ions uptake under salinity stress. Similarly, while working with Olea europaea, researchers found that using gibberellin via reducing the concentrations of sodium and chloride in olive plants, but increasing the amount of potassium chlorophyll and proline (Shekafandeh et al. 2017).

Cytokinins (CKs) achive abiotic stress adaptation in higher plants, may be through modulating various components of the photosynthetic machinery under abiotic stress conditions (Fahad et al. 2015; Gururani et al. 2015). A transcriptomic analysis showed that under salt stress, CK triggered transcriptional reprograming in Arabidopsis leaves that resulted in decreasing stress-dependent inhibition of vegetative growth and reduce premature plant aging (Golan, et al. 2017). Ma et al. (2016) showed that using of 6-benzylaminopurine alleviated the bad effects caused by salt stress in Perennial ryegrass by increasing the ability of enzymes associated with reactive oxygen species scavenging and suppression of sodium ion accumulation to keep a higher potassium/ sodium ratio attributed to the increased high-affinity K+ transporter expression.

Accumulation of abscisic acid can alleviate the bad effect of salt stress on growth, photosynthesis, and translocation. High levels of abscisic acid hormone aids plants to grow under low water content by closing stomatal openings and accumulates virous proteins and osmoprotective agents for osmotic control (Gupta and Huang 2014; Ryu and Cho 2015). The Arabidopsis abscisic acid -deficient mutants, aba1-3, died after exposure to higher salt concentration, implying that ABA provides a protective role in higher salt concentration (Cramer 2002). In a study, on rice, researchers reported the implication of ABA in the control of salt-induced cellular mechanisms resulting in sodium ion defamation from the cytoplasm (Pons et al. 2013).

Foliar spray of salt stressed-soybean with salicylic acid (SA) led to significant increase in chlorophyll, sugar, starch and proline contents, indicating that application of SA can overcome salinity (Jaiswal et al. 2014). Treatment of salicylic acid to saline soils enhanced also the salt tolerance in rice plants via less accumulation of sodium and chlorine ions, an increased concentration of endogenous SA level and augmented antioxidant enzymes such as superoxide dismutase, catalase and peroxidase (Jini and Joseph 2017; Khan et al. 2017). The cyclopentanone is a phytohormones produced from the metabolism of membrane fatty acids as jasmonates (methyl jasmonate (MeJA) and jasmonic acid) can activate the defence mechanisms of plant in response to wounding caused by insect, pathogenic organisms, and environmental stresses, such as drought, low or high temperature, and salts (Mann et al. 2015; Wani et al. 2016). OsJAZ9 is a member of the JAZ subfamily that belonging to the TIFY gene family in rice “Oryza sativa”, suppression of this gene resulted in reduction of salt tolerance. The altered salt adaptation was mainly due to changes in homeostasis of ion (especially K+), which was proved by the different expression levels of several ion transporters (Wu et al. 2015). Zhao et al. (2014), reported that salinity-response gene in bread wheat (TaAOC1 gene), encoding allene oxide cyclase involved in the metabolic pathway of α-linolenic acid, was highly expressed in both Arabidopsis and bread wheat. In both species, genetically modified lines showed an enhanced level of adaptation to salt (Zhao et al. 2014).

Different groups of organisms, such as fungi, bacteria, and plants are harbouring soils. Plant roots are the richest place colonized by microorganisms (compared to soil and other habitats) because of root exudates which are rich with nutrients. The rhizosphere area attracts different microbes that utilize the different nutrients released in the root exudates. Hence, these microbes plays an effective role in nutrition uptake and development and growth by producing biologically active secondary metabolites, as phytohormones (auxins, cytokinins, gibberellins and abscisic acid), and antimicrobial compounds. Also, they can increase plant resistance to different factors of biotic and abiotic stress, enhancing nutrient uptake and protect plants from different pathogenic soil-borne microbes (Egamberdieva et al. 2017). Microbes adopt their ability for synthesizing phytohormone in the rhizosphere for improving both plant growth and stress resistance. In plant tissue, microbial phytohormones affect the metabolic pathway of endogenous growth regulators and it are a limiting factor in changing root morphology upon exposure to different stresses as drought, salt, low and high temperature and toxicity of heavy metal (Chakraborty et al. 2015; Egamberdieva et al. 2017). For example, Bastías et al. (2018) indicated the important role of salicylic acid a in regulating the acquired resistance by endophyte against herbivores. In addition, the culture application and endophytic-association of Phoma glomerata and Penicillium sp. significantly reprogrammed the growth of host cucumber plants during salt and drought stress conditions by means of secreting gibberellins and indole acetic acid (Waqas et al. 2012). Kang et al. (2014) found that the endogenous SA and GA4 contents were significantly higher in B. cepacia, A. calcoaceticus and Promicromonospora sp inoculated plants than non-inoculated cucumbers under both salinity and drought stresses.

Iqbal et al. (2016) showed that inoculation of maize with auxin producing rhizobacterial stains enhanced grain yield, fresh biomass and grains contents of phosphorous under saline field conditions. Results of Khan et al. (2012) revealed that upon salinity stress Paecilomyces formosus, a GAs and indole acetic acid secreting fungal strain, inoculation higher endogenous gibberellins (GA3, GA4, GA12 and GA20) contents in the tissue of cucumber plants which resulted in salinity stress modulation. Penicillium janthinellum association helped Sitiens plants, tomato abscisic acid (ABA)-deficient mutants, that had reduced the growth under normal and salt stress to synthesis significantly higher abscisic acid to modulate stress responses (Khan et al. 2013; Selvakumar et al. 2014).

A study by Sajjad Asaf and colleagues reported that the combined treatment of soybean plants with Sphingomonas sp. along with trehalose imporoved endogenous jasmonic (JA) and abscisic (ABA) acid contents and allivated the negative effects of osmotic stress induced by drought (Asaf et al. 2017; Maamoun et al. 2021). It has also been reported that most of the alfalfa plants inoculated with engineered Sinorhizobium strains which overproducing zeatins survived under severe drought stress and the no apparent change for nitrogenase activity in their root nodules was reported (Rodriguez et al. 2009; Xu et al. 2012).

In conclusion, preceding data presented in this review underpin the view that seed biopriming approach is a promising pre-sowing treatment conferring better tolerance to plants against diverse abiotic stressors. Steering research on fungal biopriming under salt stresses will help to enhance our knowledge and understanding of the action mechanisms adopted by fungal endophytes to reach to salinity tolerance in host plants.

Fig 1.

Figure 1.The common recommended method for seed bio-priming
Journal of Plant Biotechnology 2022; 49: 107-117https://doi.org/10.5010/JPB.2022.49.2.107

Table 1 . Common priming techniques and the agents utilized in each case.

Priming ConceptPriming technique
Osmopriming/osmotic priming haloprimingImmersion of the seeds in an osmotic solution of water with a low potential, rather than pure water.
Priming agents: Polyethylene glycol (PEG), mannitol, sorbitol, glycerol, and inorganic salts, such as sodium chloride (NaCl), potassium chloride (KCl), potassium nitrate (KNO3), potassium phosphate (K3PO4), and calcium chloride (CaCl2).
Solid matrix priming (SMP)/solid primingThe seeds are mixed with a solid matrix (organic or inorganic) capable of adjusting the moisture content and controlling the uptake of water.
Priming agents: Vermiculite, peat moss, charcoal, sand, clay
HormoprimingThe seeds are soaked in water with plant growth regulators and hormones, leading to an enhancement of seed germination.
Priming agents: Abscisic acid (ABA), auxins (AU), gibberellins (GAs), kinetin, ethylene, polyamines, and salicylic acid (SA).
ThermoprimingPre-sowing seeds at different temperatures is referred to as thermopriming.
Priming agent: Low temperatures or high temperatures.
ChemoprimingThe seeds are soaked in different chemical solutions.
Priming agents: Ascorbic acid, glutathione, tocopherol, melatonin, and proline, H2O2, sodium nitroprusside, urea, thiourea, mannose, chitosan, fungicides, etc.
Hydropriming/On-farm primingThe seeds are soaked in sterilized distilled water and then re-dried using air to their original case.
Priming agent: Sterilized distilled water
Biopriming/biological seed treatmentA combination of seed hydration by soaking; then, the seeds can be inoculated with beneficial microbes.
Priming agents: Beneficial microbes

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